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Publications

                                                                     2017


Adam N, Erler T, Kallenbach M, Kaltenpoth M, Kunert G, Baldwin IT, Schuman MC (2017) Sex ratio of mirid populations shifts in response to hostplant co-infestation or altered cytokinin signaling. J Integr Plant Biol 59 (1):44-59.


Aiyar P, Schaeme D, García-Altares M, Carrasco Flores D, Dathe H, Hertweck C, Sasso S, Mittag M (2017) Antagonistic bacteria disrupt calcium homeostasis and immobilize algal cells. Nat Commun  doi: 10.1038/s41467-017-01547-8


Alonso P, Bartram S, Arias-Cordero E, Novoselov A, Halty-deLeon L, Shao Y, Boland W (2017) In vivo isotopic labeling of symbiotic bacteria involved in cellulose degradation and nitrogen recycling within the gut of the forest cockchafer (Melolontha hippocastani). Frontiers Microbiol 8:1970


Alsufyani T, Weiss A, Wichard T (2017) Time Course Exo-Metabolomic Profiling in the Green Marine Macroalga Ulva (Chlorophyta) for Identification of Growth Phase-Dependent Biomarkers. Mar Drugs 15 (1):20.


Bakshi M, Sherameti I, Meichsner D, Thürich J, Varma A, Johri AK, Yeh KW, Oelmüller R (2017) Piriformospora indica Reprograms Gene Expression in Arabidopsis Phosphate Metabolism Mutants But Does Not Compensate for Phosphate Limitation. Front Microbiol 8:15.


Blin K, Wolf T, Chevrette MG, Lu X, Schwalen CJ, Kautsar SA, Suarez Duran HG, de los Santos ELC, Kim HU, Nave M, Dickschat JS, Mitchell DA, Shelest E, Breitling R, Takano E, Lee SY, Weber T, Medema MH (2017) antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification. Nucleic Acids Res 45 (W1):W36-W41.


Brandt P, García-Altares M, Nett M, Hertweck C, Hoffmeister D (2017) Induced Chemical Defense of a Mushroom by a Double-Bond-Shifting Polyene Synthase. Angew Chem Int Edit 56:5937-5941.


Cooper RE, Eusterhues K, Wegner CE, Totsche KU, Küsel K (2017) Ferrihydrite associated organic matter (OM) stimulates reduction by Shewanella oneidensis MR-1 and a complex microbial consortia. Biogeosciences Discuss 2017:1-32.


de Vries RP et al. (112 authors including Shelest E and Brakhage AA) (2017) Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. Genome Biol 18:28.


Englert C, Pröhl M, Czaplewska JA, Fritzsche C, Preußger E, Schubert US, Traeger A, Gottschaldt M (2017) D-Fructose-Decorated Poly(ethylene imine) for Human Breast Cancer Cell Targeting. Macromol Biosci doi: 10.1002/mabi.201600502.


Flórez LV, Scherlach K, Gaube P, Ross C, Sitte E, Hermes C, Rodrigues A, Hertweck C, Kaltenpoth M (2017) Antibiotic-producing symbionts dynamically transition between plant pathogenicity and insect-defensive mutualism. Nature Commun doi: 10.1038/ncomms15172.


Ghaderiardakani F, Coates JC, Wichard T (2017) Bacteria-induced morphogenesis of Ulva intestinalis and Ulva mutabilis (Chlorophyta): a contribution to the lottery theory. FEMS Microbiol Ecol 93 (8):fix094.


Guljamow A, Kreische M, Ishida K, Liaimer A, Altermark B, Bähr L, Hertweck C, Ehwald R, Dittmann E (2017) High-density cultivation of terrestrial Nostoc strains leads to reprogramming of secondary metabolome. Appl Environ Microbiol. doi:0.1128/AEM.01510-17.


Hirth M, Liverani S, Mahlow S, Bouget F-Y, Pohnert G, Sasso S (2017) Metabolic profiling identifies trehalose as an abundant and diurnally fluctuating metabolite in the microalga Ostreococcus tauri. Metabolomics 13 (6):68.


Hua MS, Kumar RS, Shyur LF, Cheng YB, Tian Z, Oelmüller R, Yeh KW (2017) Metabolomic profiles delineate symbiotic functions of the root endophytic fungus Piriformospora indica colonizing Chinese cabbage roots. Sci Rep 7 (1):9291. doi:doi: 10.1038/s41598-017-08715-2


Jimenez-Aleman G, Seçinti S, W B (2017a) A succinct access to ω-hydroxylated jasmonates via olefin metathesis. Z Naturforsch 72: 285-292.


Jimenez-Aleman GH, Machado RAR, Baldwin IT, Boland W (2017) JA-Ile-macrolactones uncouple growth and defense in wild tobacco. Org Biomol Chem 15 (16):3391-3395.


Katsaros C, Weiss A, Llangos I, Theodorou I, Wichard T (2017) Cell structure and microtubule organisation during gametogenesis of Ulva mutabilis Føyn (Chlorophyta). Bot Mar 60 (2):123-135.


Kessler RW, Crecelius AC, Schubert US, Wichard T (2017) In situ monitoring of molecular changes during cell differentiation processes in marine macroalgae through mass spectrometric imaging. Anal Bioanal Chem 409 (20):4893-4903.


Kuhlisch C, Deicke M, Ueberschaar N, Wichard T, Pohnert G (2017) A fast and direct liquid chromatography-mass spectrometry method to detect and quantify polyunsaturated aldehydes and polar oxylipins in diatoms. Limnol Oceanogr Meth 15 (1):70-79.


Lorenz B, Wichmann C, Stöckel S, Rösch P, Popp J (2017) Cultivation-Free Raman Spectroscopic Investigations of Bacteria. Trends Microbiol 25 (5):413-424.


Meier A, Kastner A, Harries D, Wierzbicka-Wieczorek M, Majzlan J, Büchel G, Kothe E (2017a) Calcium carbonates: Induced biomineralization vs. controlled macromorpholoy Biogeosciences 14:4867-4878.


Meier A, Singh M, Kastner A, Merten D, Büchel G, Kothe E (2017b) Microbial communities in carbonate rocks - from soil via groundwater to rocks. . J Basic Microbiol:1-10.


Meyer N, Bigalke A, Kaulfuß A, Pohnert G (2017) Strategies and ecological roles of algicidal bacteria. FEMS Microbiol Rev. doi:10.1093/femsre/fux029.


Molloy M, Hertweck C (2017) Antimicrobial discovery inspired by ecological interactions. Curr Opin Microbiol doi:10.1016/j.mib.2017.09.006.


Mori JF, Ueberschaar N, Lu S, Cooper RE, Pohnert G, Küsel K (2017) Sticking together: inter-species aggregation of bacteria isolated from iron snow is controlled by chemical signaling. ISME J 11 (5):1075-1086.


Pace S, Pergola C, Dehm F, Rossi A, Gerstmeier J, Troisi F, Pein H, Schaible AM, Weinigel C, Rummler S, Northoff H, Laufer S, Maier TJ, Rådmark O, Samuelsson B, Koeberle A, Sautebin L, Werz O (2017) Androgen-mediated sex bias impairs efficiency of leukotriene biosynthesis inhibitors in males. J Clin Invest 127 (8):3167-3176.


Pace S, Rossi A, Krauth V, Dehm F, Troisi F, Bilancia R, Weinigel C, Rummler S, Werz O, Sautebin L (2017) Sex differences in prostaglandin biosynthesis in neutrophils during acute inflammation. Sci Rep 7:3759.


Pergola C, Schubert K, Pace S, Ziereisen J, Nikels F, Scherer O, Hüttel S, Zahler S, Vollmar AM, Weinigel C, Rummler S, Müller R, Raasch M, Mosig A, Koeberle A, Werz O (2017) Modulation of actin dynamics as potential macrophage subtype-targeting anti-tumour strategy. Sci Rep 7:12.


Poreddy S, Li J, Baldwin I (2017) Plant-mediated RNAi silences midgut-expressed genes in congeneric lepidopteran insects in nature. BMC Plant Biol 17:199-209


Schäfer M, Brütting C, Xu S, Ling Z, Steppuhn A, Baldwin IT, Schuman MC (2017) NaMYB8 regulates distinct, optimally distributed herbivore defense traits. J Integr Plant Biol. doi:10.1111/jipb.12593


Scherlach K, Hertweck C (2017) Mediators of mutualistic microbe-microbe interactions. Nat Prod Rep. doi:10.1039/C7NP00035A


Schieferdecker S, König S, Pace S, Werz O, Nett M (2017) Myxochelin-Inspired 5-Lipoxygenase Inhibitors: Synthesis and Biological Evaluation. ChemMedChem 12:23-27.


Shao Y, Chen B, Sun C, Ishida K, Hertweck C, Boland W (2017) Symbiont-Derived Antimicrobials Contribute to the Control of the Lepidopteran Gut Microbiota. Cell Chem Biol 24 (1):66-75.


Shelest E (2017) Transcription Factors in Fungi: TFome Dynamics, Three Major Families, and Dual-Specificity TFs. Front Genet 8:53.


Svouraki A, Garscha U, Kouloura E, Pace S, Pergola C, Krauth V, Rossi A, Sautebin L, Halabalaki M, Werz O, Gaboriaud-Kolar N, Skaltsounis AL (2017) Evaluation of Dual 5-Lipoxygenase/Microsomal Prostaglandin E2 Synthase-1 Inhibitory Effect of Natural and Synthetic Acronychia-Type Isoprenylated Acetophenones. J Nat Prod 80 (3):699-706.


Tauber JP, Gallegos-Monterrosa R, Kovács AT, Shelest E, Hoffmeister D (2017) Dissimilar pigment regulation in Serpula lacrymans and Paxillus involutus during inter-kingdom interactions. Microbiology. doi: 10.1099/mic.0.000582


Thomas L, Rao Z, Gerstmeier J, Raasch M, Weinigel C, Rummler S, Menche D, Müller R, Pergola C, Mosig A, Werz O (2017) Selective upregulation of TNFα expression in classically-activated human monocyte-derived macrophages (M1) through pharmacological interference with V-ATPase. Biochem Pharmacol 130:71-82.


Wang M, Schoettner M, Xu S, Paetz C, Wilde J, Baldwin IT, Groten K (2017) Catechol, a major component of smoke, influences primary root growth and root hair elongation through reactive oxygen species-mediated redox signaling. New Phytol 213 (4):1755-1770.


Weiss A, Costa R, Wichard T (2017) Morphogenesis of Ulva mutabilis (Chlorophyta) induced by Maribacter species (Bacteroidetes, Flavobacteriaceae). Bot Mar 60 (2):197-206.


 

                                                                      2016


Baccile JA, Spraker JE, Le HH, Brandenburger E, Gomez C, Bok JW, Macheleidt J, Brakhage AA, Hoffmeister D, Keller NP, Schroeder FC (2016) Plant-like biosynthesis of isoquinoline alkaloids in Aspergillus fumigatus. Nat Chem Biol 12 (6):419-U470.


Bondoc KGV, Lembke C, Vyverman W, Pohnert G (2016) Searching for a Mate: Pheromone-Directed Movement of the Benthic Diatom Seminavis robusta. Microbial Ecol 72 (2):287-294.


Englert C, Fevre M, Wojtecki RJ, Cheng W, Xu Q, Yang C, Ke X, Hartlieb M, Kempe K, García JM, Ono RJ, Schubert US, Yang YY, Hedrick JL (2016) Facile carbohydrate-mimetic modifications of poly(ethylene imine) carriers for gene delivery applications. Polym Chem 7 (37):5862-5872.


Englert C, Trützschler AK, Raasch M, Bus T, Borchers P, Mosig AS, Traeger A, Schubert US (2016) Crossing the blood-brain barrier: Glutathione-conjugated poly(ethylene imine) for gene delivery. J Control Release 241:1-14.


Forino M, Pace S, Chianese G, Santagostini L, Werner M, Weinigel C, Rummler S, Fico G, Werz O, Taglialatela-Scafati O (2016) Humudifucol and Bioactive Prenylated Polyphenols from Hop (Humulus lupulus cv. "Cascade"). J Nat Prod 79:590-597.


Gerstmeier J, Newcomer ME, Dennhardt S, Romp E, Fischer J, Werz O, Garscha U (2016) 5-Lipoxygenase-Activating Protein rescues activity of 5-lipoxygenase mutations that delay nuclear membrane association and disrupt product formation. FASEB J 30:1892-1900.


Grueneberg J, Engelen A, Costa R, Wichard T (2016) Macroalgal morphogenesis induced by waterborne compounds and bacteria in costal seawater. PLOS One 11 (1):22.


Guo H, Kreuzenbeck NB, Otani S, Garcia-Altares M, Dahse H-M, Weigel C, Aanen DK, Hertweck C, Poulsen M, Beemelmanns C (2016) Pseudoxylallemycins A-F, Cyclic Tetrapeptides with Rare Allenyl Modifications Isolated from Pseudoxylaria sp. X802: A Competitor of Fungus-Growing Termite Cultivars. Org Lett 18 (14):3338-3341.


Heiling S, Khanal S, Barsch A, Zurek G, Baldwin IT, Gaquerel E (2016) Using the knowns to discover the unknowns: MS-based dereplication uncovers structural diversity in 17-hydroxygeranyllinalool diterpene glycoside production in the Solanaceae. Plant J 85 (4):561-577.


Kalb D, Heinekamp T, Schieferdecker S, Nett M, Brakhage AA, Hoffmeister D (2016) An Iterative O-Methyltransferase Catalyzes 1,11-Dimethylation of Aspergillus fumigatus Fumaric Acid Amides. ChemBioChem 17:1813-1817.


Kurth C, Kage H, Nett M (2016) Siderophores as molecular tools in medical and environmental applications. Org Biomol Chem 14:8212-8227.


Kurth C, Schieferdecker S, Athanasopoulou K, Seccareccia I, Nett M (2016) Variochelins, Lipopeptide Siderophores from Variovorax boronicumulans Discovered by Genome Mining. J Nat Prod 79:865-872.


Li D, Heiling S, Baldwin IT, Gaquerel E (2016) Illuminating a plant's tissue-specific metabolic diversity using computational metabolomics and information theory. Proc Natl Acad Sci 113 (47):E7610-E7618.


Liening S, Scriba GKE, Rummler S, Weinigel C, Kleinschmidt TK, Haeggström JZ, Werz O, Garscha U (2016) Development of smart cell-free and cell-based assay systems for investigation of leukotriene C4 synthase activity and evaluation of inhibitors. Biochim Biophys Acta 1861 (11):1605-1613.


Machado RAR, McClure M, Hervé MR, Baldwin IT, Erb M (2016) Benefits of jasmonate-dependent defenses against vertebrate herbivores in nature. eLife 5:21.


Macheleidt J, Mattern DJ, Fischer J, Netzker T, Weber J, Schroeckh V, Valiante V, Brakhage AA (2016) Regulation and Role of Fungal Secondary Metabolites. Annual Review of Genetics, Vol 50, 371-392.


Netzker T, Schroeckh V, Gregory MA, Flak M, Krespach MKC, Leadlay PF, Brakhage AA (2016) An Efficient Method To Generate Gene Deletion Mutants of the Rapamycin-Producing Bacterium Streptomyces iranensis HM 35. Appl Environ Microbiol 82 (12):3481-3492.


Noumsi JC, Pourhassan N, Darnajoux R, Deicke M, Wichard T, Burrus V, Bellenger J-B (2016) Effect of organic matter on nitrogenase metal cofactors homeostasis in Azotobacter vinelandii under diazotrophic conditions. Environ Microbiol Rep 8:76-84.


Pahlow S, Stöckel S, Pollok S, Cialla-May D, Rösch P, Weber K, Popp J (2016) Rapid identification of Pseudomonas spp. via Raman Spectroscopy Using Pyoverdine as Capture Probe. Anal Chem 88 (3):1570-1577.


Rossi A, Pace S, Tedesco F, Pagano E, Guerra G, Troisi F, Werner M, Roviezzo F, Zjawiony JK, Werz O, Izzo AA, Capasso R (2016) The hallucinogenic diterpene salvinorin A inhibits leukotriene synthesis in experimental models of inflammation. Pharmacol Res 106:64-71.


Schäfer M, Brütting C, Baldwin IT, Kallenbach M (2016) High-throughput quantification of more than 100 primary- and secondary-metabolites, and phytohormones by a single solid-phase extraction based sample preparation with analysis by UHPLC-HESI-MS/MS. Plant Meth 12:18.


Shelest E, Wingender E (2016) Systems Biology of Transcription Regulation. Front Genet 7:124.

Stöckel S, Kirchhoff J, Neugebauer U, Rösch P, Popp J (2016) The application of Raman spectroscopy for the detection and identification of microorganisms. J Raman Spectrosc 47 (1):89-109.


Tauber JP, Schroeckh V, Shelest E, Brakhage AA, Hoffmeister D (2016) Bacteria induce pigment formation in the basidiomycete Serpula lacrymans. Environ Microbiol 18:5218-5227.


Teh BS, Apel J, Shao Y, Boland W (2016) Colonization of the intestinal tract of the polyphagous pest Spodoptera littoralis with the GFP-tagged indigenous gut bacterium Enterococcus mundtii. Front Microbiol 7:928.


Wichard T (2016) Bakterien-Algen-Interaktionen: Die Grünalge Ulva (Chlorophyta) kommt nur mit den richtigen Bakterien in Form. Rundgespräche Forum Ökologie 45:69-82.


Wichard T (2016) Bakterien-induzierte Morphogenese der marinen Makroalge. Biospektrum 22:585-588.


Wichard T (2016) Identification of Metallophores and Organic Ligands in the Chemosphere of the Marine Macroalga Ulva (Chlorophyta) and at Land-Sea Interfaces. Front Mar Sci, doi.org/10.3389/fmars.2016.00131.


Wojtas KP, Riedrich M, Lu JY, Winter P, Winkler T, Walter S, Arndt H-D (2016) Total Synthesis of Nosiheptide. Angew Chem Int Edit 55 (33):9772-9776.


Wolf T, Shelest V, Nath N, Shelest E (2016) CASSIS and SMIPS: promoter-based prediction of secondary metabolite gene clusters in eukaryotic genomes. Bioinformatics 32 (8):1138-1143.

 


 

 

                                                                      2015


Bakshi M, Vahabi K, Bhattacharya S, Sherameti I, Varma A, Yeh KW, Baldwin I, Johri AK, Oelmüller R (2015) WRKY6 restricts Piriformospora indica-stimulated and phosphate-induced root development in Arabidopsis. BMC Plant Biol 15:19.


Bode HB, Brachmann AO, Jadhav KB, Seyfarth L, Dauth C, Fuchs SW, Kaiser M, Waterfield NR, Sack H, Heinemann SH, Arndt H-D (2015) Structure Elucidation and Activity of Kolossin A, the D-/L-Pentadecapeptide Product of a Giant Nonribosomal Peptide Synthetase. Angew Chem Int Edit 54 (35):10352-10355.


Braesel J, Götze S, Shah F, Heine D, Tauber J, Hertweck C, Tunlid A, Stallforth P, Hoffmeister D (2015) Three Redundant Synthetases Secure Redox-Active Pigment Production in the Basidiomycete Paxillus involutus. Chem Biol 22 (10):1325-1334.


Gerstmeier J, Weinigel C, Rummler S, Rådmark O, Werz O, Garscha U (2015) Time-resolved in situ assembly of the leukotriene-synthetic 5-LO / FLAP complex in blood leukocytes. FASEB J 30:276-285.


Hom EFY, Aiyar P, Schaeme D, Mittag M, Sasso S (2015) A Chemical Perspective on Microalgal-Microbial Interactions. Trends Plant Sci 20 (11):689-693.


Korp J, Koenig S, Schieferdecker S, Dahse H-M, Koenig GM, Werz O, Nett M (2015) Harnessing Enzymatic Promiscuity in Myxochelin Biosynthesis for the Production of 5-Lipoxygenase Inhibitors. ChemBioChem 16:2445-2450.


Kuhlisch C, Pohnert G (2015) Metabolomics in chemical ecology. Nat Prod Rep 32 (7):937-955.

Mattern DJ, Valiante V, Unkles SE, Brakhage AA (2015) Synthetic biology of fungal natural products. Front Microbiol 6:7.


Netzker T, Fischer J, Weber J, Mattern DJ, König CC, Valiante V, Schroeckh V, Brakhage AA (2015) Microbial communication leading to the activation of silent fungal secondary metabolite gene clusters. Front Microbiol 6:13.


Neugebauer U, Rösch P, Popp J (2015) Raman spectroscopy towards clinical application: drug monitoring and pathogen identification. Int J Antimicrob Agents 46:S35-S39.


Novoselov A, Becker T, Pauls G, von Reuss SH, Boland W (2015) Spodoptera littoralis detoxifies neurotoxic 3-nitropropanoic acid by conjugation with amino acids. Insect Biochem Mol Biol 63:97-103.


Oertel W, Wichard T, Weissgerber A (2015) Transformation of Ulva mutabilis (Chlorophyta) by vector plasmids integrating into the genome. J Phycol 51 (5):963-979.


Scherer O, Maess MB, Lindner S, Garscha U, Weinigel C, Rummler S, Werz O, Lorkowski S (2015) A procedure for efficient non-viral siRNA transfection of primary human monocytes using nucleofection. J Immunol Methods 422:118-124.


Schieferdecker S, König S, Koeberle A, Dahse H-M, Werz O, Nett M (2015) Myxochelins Target Human 5-Lipoxygenase. J Nat Prod 78:335-338.


Shabuer G, Ishida K, Pidot SJ, Roth M, Dahse H-M, Hertweck C (2015) Plant pathogenic anaerobic bacteria use aromatic polyketides to access aerobic territory. Science 350 (6261):670-674.


Shelest E, Heimerl N, Fichtner M, Sasso S (2015) Multimodular type I polyketide synthases in algae evolve by module duplications and displacement of AT domains in trans. BMC Genomics 16:15.


Stöckel S, Stanca AS, Helbig J, Rösch P, Popp J (2015) Raman spectroscopic monitoring of the growth of pigmented and non-pigmented Mycobacteria. Anal Bioanal Chem 407:8919-8923.


Sun C, Shao YQ, Vahabi K, Lu J, Bhattacharya S, Dong SQ, Yeh KW, Sherameti I, Lou BG, Baldwin IT, Oelmüller R (2014) The beneficial fungus Piriformospora indica protects Arabidopsis from Verticillium dahliae infection by downregulation plant defense responses. BMC Plant Biol 14:16.


Vesty EF, Kessler RW, Wichard T, Coates JC (2015) Regulation of gametogenesis and zoosporogenesis in Ulva linza (Chlorophyta): comparison with Ulva mutabilis and potential for laboratory culture. Front Plant Sci 6:8.


Wichard T (2015) Exploring bacteria-induced growth and morphogenesis in the green macroalga order Ulvales (Chlorophyta). Front Plant Sci 6:19.


Wichard T, Charrier B, Mineur F, Bothwell JH, De Clerck O, Coates JC (2015) The green seaweed Ulva: a model system to study morphogenesis. Front Plant Sci 6:8.


Wick J, Heine D, Lackner G, Misiek M, Tauber J, Jagusch H, Hertweck C, Hoffmeister D (2015) A Fivefold Parallelized Biosynthetic Process Secures Chlorination of Armillaria mellea (honey mushroom) Toxins. Appl Environ Microbiol 82 (4):1196-1204.